PluginBench
MCP Server
Active
GPL-3.0

breedsim-mcp MCP Server

io.github.musharna/breedsim-mcp

RepositoryRegistry

What is the breedsim-mcp MCP server?

Breeding-scheme simulation via AlphaSimR. Needs R, AlphaSimR and libtirpc-dev on the host.

How to install breedsim-mcp

Copy-paste configuration for popular MCP clients.

transport: stdio
Config generated by PluginBench — verify against the source before use.
Environment / auth
  • OMP_NUM_THREADS

    Pinned to '1' at import so AlphaSimR results are reproducible; overriding it makes runs non-deterministic and the server reports that in every response.

Claude Desktop
~/Library/Application Support/Claude/claude_desktop_config.json
{
  "mcpServers": {
    "breedsim-mcp": {
      "command": "uvx",
      "args": [
        "breedsim-mcp"
      ],
      "env": {
        "OMP_NUM_THREADS": "<YOUR_OMP_NUM_THREADS>"
      }
    }
  }
}
Cursor
~/.cursor/mcp.json
{
  "mcpServers": {
    "breedsim-mcp": {
      "command": "uvx",
      "args": [
        "breedsim-mcp"
      ],
      "env": {
        "OMP_NUM_THREADS": "<YOUR_OMP_NUM_THREADS>"
      }
    }
  }
}
Windsurf
~/.codeium/windsurf/mcp_config.json
{
  "mcpServers": {
    "breedsim-mcp": {
      "command": "uvx",
      "args": [
        "breedsim-mcp"
      ],
      "env": {
        "OMP_NUM_THREADS": "<YOUR_OMP_NUM_THREADS>"
      }
    }
  }
}
VS Code
.vscode/mcp.json
{
  "servers": {
    "breedsim-mcp": {
      "type": "stdio",
      "command": "uvx",
      "args": [
        "breedsim-mcp"
      ],
      "env": {
        "OMP_NUM_THREADS": "<YOUR_OMP_NUM_THREADS>"
      }
    }
  }
}
Claude Code
claude mcp add breedsim-mcp --env OMP_NUM_THREADS=<YOUR_OMP_NUM_THREADS> -- uvx breedsim-mcp

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