Biomodels MCP Server

io.github.pipeworx-io/biomodels

What is the Biomodels MCP server?

BioModels — the public repository of curated, executable mathematical models of biological systems…

Copy-paste configuration for popular MCP clients.

transport: http

Config generated by PluginBench — verify against the source before use.

~/.cursor/mcp.json

{
  "mcpServers": {
    "biomodels": {
      "url": "https://gateway.pipeworx.io/biomodels/mcp"
    }
  }
}

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BioPortal — NCBO's biomedical ontology repository (data.bioontology.org).

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bioRxiv / medRxiv MCP

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