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pytorch-patterns

affaan-m/ecc

PyTorch patterns and best practices for robust, efficient, reproducible deep learning pipelines.

What is pytorch-patterns?

Reference guide for idiomatic PyTorch development covering device-agnostic code, reproducibility, model architecture, training loops, data pipelines, and checkpointing. Use when building new models, optimizing training, or reviewing deep learning code.

  • Device-agnostic code patterns that work on CPU and GPU without hardcoding
  • Reproducibility setup with seed control across all sources
  • Explicit tensor shape management and documentation in forward passes
  • Clean nn.Module architecture with proper weight initialization
  • Standard training and validation loops with mixed precision and gradient clipping
  • Efficient DataLoader configuration with parallel loading and memory pinning

How to install pytorch-patterns

npx skills add null --skill pytorch-patterns
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How to use pytorch-patterns

  1. 1.Review the Core Principles section for device-agnostic and reproducibility patterns
  2. 2.Apply model architecture patterns when defining nn.Module subclasses
  3. 3.Use the standard training loop template as a base for your training code
  4. 4.Implement the validation loop pattern with @torch.no_grad() decorator
  5. 5.Configure DataLoader with num_workers, pin_memory, and persistent_workers for efficiency
  6. 6.Use the checkpoint pattern to save and resume training with full state

Use cases

Good for
  • Writing new PyTorch models or training scripts from scratch
  • Debugging training loops or data pipeline performance issues
  • Optimizing GPU memory usage and training speed
  • Setting up reproducible experiments with consistent results across runs
  • Reviewing deep learning code for best practices and anti-patterns
Who it's for
  • Machine learning engineers building PyTorch models
  • Data scientists setting up training pipelines
  • Researchers requiring reproducible deep learning experiments
  • Developers optimizing GPU utilization and training performance

pytorch-patterns FAQ

Why use device-agnostic code instead of .cuda()?

Device-agnostic code using torch.device() works on both CPU and GPU, preventing crashes when GPU is unavailable and making code portable across different hardware.

What should I set for reproducibility?

Set seeds for torch, torch.cuda, numpy, and random; disable cudnn.benchmark and enable cudnn.deterministic for fully reproducible results.

Why document tensor shapes in forward passes?

Shape annotations prevent dimension mismatches, make debugging easier, and help catch errors early when tensor sizes don't match expected layer inputs.

What's the benefit of num_workers in DataLoader?

num_workers enables parallel data loading on CPU while GPU trains, significantly reducing data bottlenecks and improving overall training throughput.

When should I use mixed precision training?

Use mixed precision (torch.amp.autocast) with GradScaler to reduce memory usage and speed up training on modern GPUs while maintaining accuracy.

Full instructions (SKILL.md)

Source of truth, from affaan-m/ecc.


name: pytorch-patterns description: PyTorch deep learning patterns and best practices for building robust, efficient, and reproducible training pipelines, model architectures, and data loading. metadata: origin: ECC

PyTorch Development Patterns

Idiomatic PyTorch patterns and best practices for building robust, efficient, and reproducible deep learning applications.

When to Activate

  • Writing new PyTorch models or training scripts
  • Reviewing deep learning code
  • Debugging training loops or data pipelines
  • Optimizing GPU memory usage or training speed
  • Setting up reproducible experiments

Core Principles

1. Device-Agnostic Code

Always write code that works on both CPU and GPU without hardcoding devices.

# Good: Device-agnostic
device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
model = MyModel().to(device)
data = data.to(device)

# Bad: Hardcoded device
model = MyModel().cuda()  # Crashes if no GPU
data = data.cuda()

2. Reproducibility First

Set all random seeds for reproducible results.

# Good: Full reproducibility setup
def set_seed(seed: int = 42) -> None:
    torch.manual_seed(seed)
    torch.cuda.manual_seed_all(seed)
    np.random.seed(seed)
    random.seed(seed)
    torch.backends.cudnn.deterministic = True
    torch.backends.cudnn.benchmark = False

# Bad: No seed control
model = MyModel()  # Different weights every run

3. Explicit Shape Management

Always document and verify tensor shapes.

# Good: Shape-annotated forward pass
def forward(self, x: torch.Tensor) -> torch.Tensor:
    # x: (batch_size, channels, height, width)
    x = self.conv1(x)    # -> (batch_size, 32, H, W)
    x = self.pool(x)     # -> (batch_size, 32, H//2, W//2)
    x = x.view(x.size(0), -1)  # -> (batch_size, 32*H//2*W//2)
    return self.fc(x)    # -> (batch_size, num_classes)

# Bad: No shape tracking
def forward(self, x):
    x = self.conv1(x)
    x = self.pool(x)
    x = x.view(x.size(0), -1)  # What size is this?
    return self.fc(x)           # Will this even work?

Model Architecture Patterns

Clean nn.Module Structure

# Good: Well-organized module
class ImageClassifier(nn.Module):
    def __init__(self, num_classes: int, dropout: float = 0.5) -> None:
        super().__init__()
        self.features = nn.Sequential(
            nn.Conv2d(3, 64, kernel_size=3, padding=1),
            nn.BatchNorm2d(64),
            nn.ReLU(inplace=True),
            nn.MaxPool2d(2),
        )
        self.classifier = nn.Sequential(
            nn.Dropout(dropout),
            nn.Linear(64 * 16 * 16, num_classes),
        )

    def forward(self, x: torch.Tensor) -> torch.Tensor:
        x = self.features(x)
        x = x.view(x.size(0), -1)
        return self.classifier(x)

# Bad: Everything in forward
class ImageClassifier(nn.Module):
    def __init__(self):
        super().__init__()

    def forward(self, x):
        x = F.conv2d(x, weight=self.make_weight())  # Creates weight each call!
        return x

Proper Weight Initialization

# Good: Explicit initialization
def _init_weights(self, module: nn.Module) -> None:
    if isinstance(module, nn.Linear):
        nn.init.kaiming_normal_(module.weight, mode="fan_out", nonlinearity="relu")
        if module.bias is not None:
            nn.init.zeros_(module.bias)
    elif isinstance(module, nn.Conv2d):
        nn.init.kaiming_normal_(module.weight, mode="fan_out", nonlinearity="relu")
    elif isinstance(module, nn.BatchNorm2d):
        nn.init.ones_(module.weight)
        nn.init.zeros_(module.bias)

model = MyModel()
model.apply(model._init_weights)

Training Loop Patterns

Standard Training Loop

# Good: Complete training loop with best practices
def train_one_epoch(
    model: nn.Module,
    dataloader: DataLoader,
    optimizer: torch.optim.Optimizer,
    criterion: nn.Module,
    device: torch.device,
    scaler: torch.amp.GradScaler | None = None,
) -> float:
    model.train()  # Always set train mode
    total_loss = 0.0

    for batch_idx, (data, target) in enumerate(dataloader):
        data, target = data.to(device), target.to(device)

        optimizer.zero_grad(set_to_none=True)  # More efficient than zero_grad()

        # Mixed precision training
        with torch.amp.autocast("cuda", enabled=scaler is not None):
            output = model(data)
            loss = criterion(output, target)

        if scaler is not None:
            scaler.scale(loss).backward()
            scaler.unscale_(optimizer)
            torch.nn.utils.clip_grad_norm_(model.parameters(), max_norm=1.0)
            scaler.step(optimizer)
            scaler.update()
        else:
            loss.backward()
            torch.nn.utils.clip_grad_norm_(model.parameters(), max_norm=1.0)
            optimizer.step()

        total_loss += loss.item()

    return total_loss / len(dataloader)

Validation Loop

# Good: Proper evaluation
@torch.no_grad()  # More efficient than wrapping in torch.no_grad() block
def evaluate(
    model: nn.Module,
    dataloader: DataLoader,
    criterion: nn.Module,
    device: torch.device,
) -> tuple[float, float]:
    model.eval()  # Always set eval mode — disables dropout, uses running BN stats
    total_loss = 0.0
    correct = 0
    total = 0

    for data, target in dataloader:
        data, target = data.to(device), target.to(device)
        output = model(data)
        total_loss += criterion(output, target).item()
        correct += (output.argmax(1) == target).sum().item()
        total += target.size(0)

    return total_loss / len(dataloader), correct / total

Data Pipeline Patterns

Custom Dataset

# Good: Clean Dataset with type hints
class ImageDataset(Dataset):
    def __init__(
        self,
        image_dir: str,
        labels: dict[str, int],
        transform: transforms.Compose | None = None,
    ) -> None:
        self.image_paths = list(Path(image_dir).glob("*.jpg"))
        self.labels = labels
        self.transform = transform

    def __len__(self) -> int:
        return len(self.image_paths)

    def __getitem__(self, idx: int) -> tuple[torch.Tensor, int]:
        img = Image.open(self.image_paths[idx]).convert("RGB")
        label = self.labels[self.image_paths[idx].stem]

        if self.transform:
            img = self.transform(img)

        return img, label

Efficient DataLoader Configuration

# Good: Optimized DataLoader
dataloader = DataLoader(
    dataset,
    batch_size=32,
    shuffle=True,            # Shuffle for training
    num_workers=4,           # Parallel data loading
    pin_memory=True,         # Faster CPU->GPU transfer
    persistent_workers=True, # Keep workers alive between epochs
    drop_last=True,          # Consistent batch sizes for BatchNorm
)

# Bad: Slow defaults
dataloader = DataLoader(dataset, batch_size=32)  # num_workers=0, no pin_memory

Custom Collate for Variable-Length Data

# Good: Pad sequences in collate_fn
def collate_fn(batch: list[tuple[torch.Tensor, int]]) -> tuple[torch.Tensor, torch.Tensor]:
    sequences, labels = zip(*batch)
    # Pad to max length in batch
    padded = nn.utils.rnn.pad_sequence(sequences, batch_first=True, padding_value=0)
    return padded, torch.tensor(labels)

dataloader = DataLoader(dataset, batch_size=32, collate_fn=collate_fn)

Checkpointing Patterns

Save and Load Checkpoints

# Good: Complete checkpoint with all training state
def save_checkpoint(
    model: nn.Module,
    optimizer: torch.optim.Optimizer,
    epoch: int,
    loss: float,
    path: str,
) -> None:
    torch.save({
        "epoch": epoch,
        "model_state_dict": model.state_dict(),
        "optimizer_state_dict": optimizer.state_dict(),
        "loss": loss,
    }, path)

def load_checkpoint(
    path: str,
    model: nn.Module,
    optimizer: torch.optim.Optimizer | None = None,
) -> dict:
    checkpoint = torch.load(path, map_location="cpu", weights_only=True)
    model.load_state_dict(checkpoint["model_state_dict"])
    if optimizer:
        optimizer.load_state_dict(checkpoint["optimizer_state_dict"])
    return checkpoint

# Bad: Only saving model weights (can't resume training)
torch.save(model.state_dict(), "model.pt")

Performance Optimization

Mixed Precision Training

# Good: AMP with GradScaler
scaler = torch.amp.GradScaler("cuda")
for data, target in dataloader:
    with torch.amp.autocast("cuda"):
        output = model(data)
        loss = criterion(output, target)
    scaler.scale(loss).backward()
    scaler.step(optimizer)
    scaler.update()
    optimizer.zero_grad(set_to_none=True)

Gradient Checkpointing for Large Models

# Good: Trade compute for memory
from torch.utils.checkpoint import checkpoint

class LargeModel(nn.Module):
    def forward(self, x: torch.Tensor) -> torch.Tensor:
        # Recompute activations during backward to save memory
        x = checkpoint(self.block1, x, use_reentrant=False)
        x = checkpoint(self.block2, x, use_reentrant=False)
        return self.head(x)

torch.compile for Speed

# Good: Compile the model for faster execution (PyTorch 2.0+)
model = MyModel().to(device)
model = torch.compile(model, mode="reduce-overhead")

# Modes: "default" (safe), "reduce-overhead" (faster), "max-autotune" (fastest)

Quick Reference: PyTorch Idioms

IdiomDescription
model.train() / model.eval()Always set mode before train/eval
torch.no_grad()Disable gradients for inference
optimizer.zero_grad(set_to_none=True)More efficient gradient clearing
.to(device)Device-agnostic tensor/model placement
torch.amp.autocastMixed precision for 2x speed
pin_memory=TrueFaster CPU→GPU data transfer
torch.compileJIT compilation for speed (2.0+)
weights_only=TrueSecure model loading
torch.manual_seedReproducible experiments
gradient_checkpointingTrade compute for memory

Anti-Patterns to Avoid

# Bad: Forgetting model.eval() during validation
model.train()
with torch.no_grad():
    output = model(val_data)  # Dropout still active! BatchNorm uses batch stats!

# Good: Always set eval mode
model.eval()
with torch.no_grad():
    output = model(val_data)

# Bad: In-place operations breaking autograd
x = F.relu(x, inplace=True)  # Can break gradient computation
x += residual                  # In-place add breaks autograd graph

# Good: Out-of-place operations
x = F.relu(x)
x = x + residual

# Bad: Moving data to GPU inside the training loop repeatedly
for data, target in dataloader:
    model = model.cuda()  # Moves model EVERY iteration!

# Good: Move model once before the loop
model = model.to(device)
for data, target in dataloader:
    data, target = data.to(device), target.to(device)

# Bad: Using .item() before backward
loss = criterion(output, target).item()  # Detaches from graph!
loss.backward()  # Error: can't backprop through .item()

# Good: Call .item() only for logging
loss = criterion(output, target)
loss.backward()
print(f"Loss: {loss.item():.4f}")  # .item() after backward is fine

# Bad: Not using torch.save properly
torch.save(model, "model.pt")  # Saves entire model (fragile, not portable)

# Good: Save state_dict
torch.save(model.state_dict(), "model.pt")

Remember: PyTorch code should be device-agnostic, reproducible, and memory-conscious. When in doubt, profile with torch.profiler and check GPU memory with torch.cuda.memory_summary().