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hermes-history-ingest

ar9av/obsidian-wiki

Extract knowledge from your Hermes agent history and sync it into your Obsidian wiki.

What is hermes-history-ingest?

Ingest Hermes agent memories and session transcripts into an Obsidian wiki, distilling durable knowledge from past conversations. Use this when you want to mine your ~/.hermes folder for insights, archive session learnings, or consolidate agent memories into a searchable wiki.

  • Scan ~/.hermes/memories and sessions for new or modified files
  • Parse Markdown and JSON memories, extracting core knowledge claims
  • Extract high-signal insights from JSONL session transcripts while filtering sensitive data
  • Cluster related knowledge by topic and merge into existing wiki pages
  • Update .manifest.json to track ingestion state and avoid reprocessing
  • Generate provenance markers (extracted/inferred/ambiguous) for traceability

How to install hermes-history-ingest

npx skills add https://github.com/ar9av/obsidian-wiki --skill hermes-history-ingest
Prerequisites
  • Obsidian vault with .manifest.json at root
  • Hermes installation with ~/.hermes folder (or custom $HERMES_HOME)
  • obsidian-wiki skill installed and configured
  • Read access to HERMES_HISTORY_PATH and OBSIDIAN_VAULT_PATH
Claude Code
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How to use hermes-history-ingest

  1. 1.Resolve config via Config Resolution Protocol to set OBSIDIAN_VAULT_PATH and HERMES_HISTORY_PATH
  2. 2.Read .manifest.json to check what has already been ingested
  3. 3.Scan ~/.hermes/memories and sessions to compute delta (new, modified, unchanged files)
  4. 4.Parse memories first (highest-value source), extracting knowledge claims and tags
  5. 5.Extract session JSONL insights while filtering credentials and sensitive data
  6. 6.Cluster related knowledge by topic rather than creating one page per memory
  7. 7.Route distilled knowledge to appropriate wiki locations (projects/, concepts/, skills/, entities/)
  8. 8.Run obsidian-wiki memory sync command to update .manifest.json, index.md, log.md, and hot.md

Use cases

Good for
  • Archive recurring debugging patterns and solutions from past Hermes sessions into a searchable wiki
  • Consolidate project-specific learnings from multiple agent conversations into project documentation
  • Extract tool usage patterns and techniques from session logs into a skills reference
  • Sync persistent agent memories into a personal knowledge base for long-term retention
  • Rebuild wiki knowledge after major updates using full re-ingest mode
Who it's for
  • Knowledge workers using Hermes agents who want to preserve and organize session insights
  • Teams maintaining shared Obsidian wikis and needing to integrate agent-generated knowledge
  • Researchers and developers tracking patterns across multiple agent interactions
  • Anyone building a personal knowledge management system from agent conversation history

hermes-history-ingest FAQ

What's the difference between append mode and full mode?

Append mode (default) only processes new files or files modified since last ingest, checked against .manifest.json. Full mode reprocesses everything regardless of manifest state; use it after wiki-rebuild or explicit user request for complete re-ingest.

How does the skill handle sensitive data in session transcripts?

The skill applies a critical privacy filter: removes API keys, tokens, passwords, and credentials; redacts private identifiers unless relevant and user-approved; summarizes rather than quoting raw transcripts verbatim.

Should I create one wiki page per memory or session?

No. Group memories by stable topic (concept, tool, project, technique), split mixed sessions into separate themes, and merge recurring patterns across dates. This produces a coherent wiki structure rather than scattered single-item pages.

What provenance markers should I add to ingested content?

Add ^[extracted] for content directly grounded in explicit memory/session, ^[inferred] for patterns synthesized across multiple memories, and ^[ambiguous] when memories conflict. Include base_confidence and lifecycle fields on every new page.

Can I run this skill multiple times on the same Hermes history?

Yes. The skill checks .manifest.json to track ingestion state, so repeated runs in append mode will only process new or modified files. Use full mode to force reprocessing of all files.

Full instructions (SKILL.md)

Source of truth, from ar9av/obsidian-wiki.


name: hermes-history-ingest description: > Ingest Hermes agent history into the Obsidian wiki. Use this skill when the user wants to mine their past Hermes sessions for knowledge, import their ~/.hermes folder, extract insights from previous Hermes conversations, or says things like "process my Hermes history", "add my Hermes memories to the wiki", "ingest ~/.hermes", or "what have I worked on in Hermes". Also triggers when the user mentions Hermes memories, Hermes sessions, ~/.hermes/memories, or Hermes skill logs.

Hermes History Ingest — Conversation & Memory Mining

You are extracting knowledge from the user's Hermes agent history and distilling it into the Obsidian wiki. Hermes stores both free-form memories and structured session transcripts — focus on durable knowledge, not operational telemetry.

This skill can be invoked directly or via the wiki-history-ingest router (/wiki-history-ingest hermes).

Before You Start

Writing profile: Before drafting or rewriting natural-language Markdown, read and apply the Writing Profile Resolution section in llm-wiki/SKILL.md. Framework schema, provenance, safety, and operation-specific requirements take precedence. WRITING.md preferences apply only to newly drafted or rewritten natural-language Markdown; preserve source content and structured records.

  1. Resolve config — follow the Config Resolution Protocol in llm-wiki/SKILL.md (inline @name override → walk up CWD for .env → global config → prompt setup). This gives OBSIDIAN_VAULT_PATH and HERMES_HISTORY_PATH (defaults to ~/.hermes)
  2. Read .manifest.json at the vault root to check what has already been ingested
  3. Read index.md at the vault root to understand what the wiki already contains

Ingest Modes

Append Mode (default)

Check .manifest.json for each source file. Only process:

  • Files not in the manifest (new memory files, new session logs)
  • Files whose modification time is newer than ingested_at in the manifest

Use this mode for regular syncs.

Full Mode

Process everything regardless of manifest. Use after wiki-rebuild or if the user explicitly asks for a full re-ingest.

Hermes Data Layout

Hermes stores all local artifacts under ~/.hermes/ (or $HERMES_HOME for non-default profiles).

~/.hermes/
├── memories/                          # Persistent agent memories (markdown or JSON)
│   └── *.md / *.json
├── skills/                            # Installed skills (read-only for ingest purposes)
│   └── <skill-name>/SKILL.md
├── sessions/                          # Session transcripts (if session logging is enabled)
│   └── YYYY-MM-DD/
│       └── <session-id>.jsonl
├── config.yaml                        # User config (model, theme, paths)
└── .hub/                              # Skills Hub state (lock.json, audit.log, quarantine/)

Key data sources ranked by value

  1. memories/*.md / memories/*.json — highest signal; curated persistent knowledge the agent accumulated
  2. sessions/**/*.jsonl — structured turn-by-turn transcripts; rich but noisy
  3. config.yaml — metadata only (model preferences, paths); rarely worth ingesting

Skip .hub/ internals (audit/quarantine state) and the skills/ directory (source material, not user knowledge).

Step 1: Survey and Compute Delta

Scan HERMES_HISTORY_PATH and compare against .manifest.json:

  • ~/.hermes/memories/
  • ~/.hermes/sessions/**/ (if present)

Classify each file:

  • New — not in manifest
  • Modified — in manifest but file is newer than ingested_at
  • Unchanged — already ingested and unchanged

Report a concise delta summary before deep parsing.

Step 2: Parse Memories First

Memories are the highest-value source. Hermes writes them as either:

  • Markdown — structured prose with optional frontmatter; ingest directly
  • JSON — {"content": "...", "created_at": "...", "tags": [...]} records

For each memory:

  • Extract the core knowledge claim
  • Note any tags Hermes attached (they often map to wiki categories)
  • Merge into the appropriate wiki page rather than creating one memory = one page

Step 3: Parse Session JSONL Safely

Each session JSONL line is an event envelope. Common shapes:

{"role": "user", "content": "..."}
{"role": "assistant", "content": "..."}
{"type": "tool_use", "name": "...", "input": {...}}
{"type": "tool_result", "content": "..."}

Extraction rules

  • Prioritize assistant responses that state conclusions, patterns, or decisions
  • Extract user intent from high-signal turns; skip low-information follow-ups
  • Treat tool_use / tool_result pairs as context, not primary content
  • Skip token accounting, internal plumbing, and repeated plan echoes

Critical privacy filter

Session logs can include injected instructions, tool payloads, and sensitive text. Do not ingest verbatim.

  • Remove API keys, tokens, passwords, credentials
  • Redact private identifiers unless relevant and user-approved
  • Summarize; do not quote raw transcripts verbatim

Step 4: Cluster by Topic

Do not create one wiki page per memory or session.

  • Group memories by stable topic (concept, tool, project, technique)
  • Split mixed sessions into separate themes
  • Merge recurring patterns across dates and projects
  • Use file paths or session cwd metadata to infer project scope when available

Step 5: Distill into Wiki Pages

Route extracted knowledge using existing wiki conventions:

  • Project-specific architecture/process → projects/<name>/...
  • General concepts → concepts/
  • Recurring techniques/debug playbooks → skills/
  • Tools/services/frameworks → entities/
  • Cross-session patterns → synthesis/

For each impacted project, create/update projects/<name>/<name>.md.

Writing rules

  • Distill knowledge, not chronology
  • Avoid "on date X we discussed..." unless date context is essential
  • Add summary: frontmatter on each new/updated page (1–2 sentences, ≤ 200 chars)
  • Add confidence and lifecycle fields to every new page:
    base_confidence: 0.42
    lifecycle: draft
    lifecycle_changed: <ISO date today>
    
    Leave lifecycle unchanged on update.
  • Add provenance markers:
    • ^[extracted] when directly grounded in explicit memory/session content
    • ^[inferred] when synthesizing patterns across multiple memories
    • ^[ambiguous] when memories conflict
  • Add/update provenance: frontmatter mix for each changed page

Step 6: Update Manifest, Log, and Index

Update .manifest.json

For each processed source file:

  • ingested_at, size_bytes, modified_at
  • source_type: hermes_memory | hermes_session
  • project: inferred project name (when applicable)
  • pages_created, pages_updated

Add/update a top-level summary block:

{
  "hermes": {
    "source_path": "~/.hermes/",
    "last_ingested": "TIMESTAMP",
    "memories_ingested": 42,
    "sessions_ingested": 7,
    "pages_created": 5,
    "pages_updated": 12
  }
}

Update special files

Update index.md, log.md, and hot.md with one locked call:

obsidian-wiki memory sync HERMES_HISTORY_INGEST \
  memories=<memories> sessions=<sessions> pages_updated=<pages_updated> \
  pages_created=<pages_created> mode=<mode> \
  --takeaways "Ingested 42 Hermes memories and 7 sessions; dominant themes: reasoning strategies, tool use patterns."

Never hand-edit index.md, log.md, or hot.md — the command takes the lock that keeps a parallel writer from dropping your update. --takeaways is the one-line conceptual summary that used to go in Recent Activity; omit it to leave the previous takeaways untouched.

See .skills/llm-wiki/references/MEMORY.md for the full procedure.

Privacy and Compliance

  • Distill and synthesize; avoid raw memory or transcript dumps
  • Default to redaction for anything that looks sensitive
  • Ask the user before storing personal or sensitive details
  • Keep references to other people minimal and purpose-bound

Reference

See references/hermes-data-format.md for field-level notes and extraction guidance.

QMD Refresh After Vault Writes

QMD is a search index, not the source of truth. If $QMD_WIKI_COLLECTION is empty or unset, skip this step. Run it only after this skill has written or rewritten vault markdown. If QMD refresh fails, do not roll back the vault changes; report the QMD status separately.

Use $QMD_CLI if set; otherwise use qmd.

${QMD_CLI:-qmd} update

If the output says vectors are needed or embeddings may be stale, run:

${QMD_CLI:-qmd} embed

Verify the collection with either:

${QMD_CLI:-qmd} ls "$QMD_WIKI_COLLECTION"

or, when a specific page path is known:

${QMD_CLI:-qmd} get "qmd://$QMD_WIKI_COLLECTION/<page>.md" -l 5

Record one of:

  • QMD refreshed: update + embed + verified
  • QMD refreshed: update only + verified
  • QMD skipped: QMD_WIKI_COLLECTION unset
  • QMD skipped: qmd CLI unavailable
  • QMD failed: <short error summary>