How to install experiment-design
npx skills add https://github.com/lingzhi227/agent-research-skills --skill experiment-designFull instructions (SKILL.md)
Source of truth, from lingzhi227/agent-research-skills.
name: experiment-design description: Design experiment plans with progressive stages — initial implementation, baseline tuning, creative research, and ablation studies. Plan baselines, datasets, hyperparameter sweeps, and evaluation metrics. Use when planning experiments for a research paper. argument-hint: [idea-or-plan]
Experiment Design
Design structured, progressive experiment plans for research papers.
Input
$0— Research idea, plan, or method description
References
- 4-stage progressive experiment prompts:
~/.claude/skills/experiment-design/references/stage-prompts.md
Scripts
Generate experiment design
python ~/.claude/skills/experiment-design/scripts/design_experiments.py --plan research_plan.json --output experiment_design.json
python ~/.claude/skills/experiment-design/scripts/design_experiments.py --method "contrastive learning" --task classification --format markdown
Generates baselines, ablation matrix, hyperparameter grid, metric selection. Stdlib-only.
4-Stage Progressive Framework (from AI-Scientist-v2)
Stage 1: Initial Implementation
- Focus on getting a basic working implementation
- Use a simple dataset
- Aim for basic functional correctness
- Completion: at least one working (non-buggy) implementation
Stage 2: Baseline Tuning
- Tune hyperparameters (learning rate, epochs, batch size)
- Do NOT change model architecture
- Test on at least TWO datasets
- Completion: stable training curves, improvement over Stage 1
Stage 3: Creative Research
- Explore novel improvements and insights
- Be creative and think outside the box
- Test on at least THREE datasets
- Completion: demonstrated novel improvement
Stage 4: Ablation Studies
- Systematic component analysis
- Each ablation tests a different aspect
- Use same datasets as Stage 3
- Completion: all planned ablations done
Output Format
{
"stages": [
{
"name": "initial_implementation",
"goals": ["Basic working baseline", "Simple dataset"],
"max_iterations": 5,
"completion_criteria": "Working implementation with non-zero accuracy"
}
],
"baselines": ["Method A", "Method B"],
"datasets": ["Dataset1", "Dataset2", "Dataset3"],
"metrics": ["accuracy", "F1", "inference_time"],
"ablation_components": ["component_A", "component_B"],
"hyperparameter_grid": {
"lr": [1e-4, 1e-3, 1e-2],
"batch_size": [32, 64, 128]
},
"num_seeds": 3
}
Rules
- Always start simple (Stage 1) before complex experiments
- Each stage builds on the best result from the previous stage
- Multi-seed evaluation for statistical significance
- Document every experiment run in notes.txt
- Generate figures for training curves and comparisons
Related Skills
- Upstream: research-planning, idea-generation
- Downstream: experiment-code, data-analysis
- See also: paper-assembly
Related skills
More from lingzhi227/agent-research-skills and the wider catalog.
literature-review
Conduct comprehensive literature reviews using multi-perspective dialogue simulation. Generate diverse expert personas, conduct grounded Q&A conversations, and synthesize findings into structured knowledge. Use when starting a new research project or writing a survey section.
literature-search
Search academic literature using Semantic Scholar, arXiv, and OpenAlex APIs. Returns structured JSONL with title, authors, year, venue, abstract, citations, and BibTeX. Use when the user needs to find papers, check related work, or build a bibliography.
figure-generation
Generate publication-quality scientific figures using matplotlib/seaborn with a three-phase pipeline (query expansion, code generation with execution, VLM visual feedback). Handles bar charts, line plots, heatmaps, training curves, ablation plots, and more. Use when the user needs figures, plots, or visualizations for a paper.
citation-management
Manage BibTeX citations for LaTeX papers. Harvest missing citations from a draft using Semantic Scholar, validate cite keys against .bib files, deduplicate entries, and format bibliography. Use when working with references, BibTeX, or citations.
latex-formatting
Handle LaTeX formatting, templates, and styling for academic papers. Set up conference templates (ICML, ICLR, NeurIPS, AAAI, ACL), fix formatting issues, manage packages, and ensure venue-specific compliance. Use when the user needs to set up a paper template, fix LaTeX formatting, or prepare for submission.
data-analysis
Generate statistical analysis code with 4-round review. Select appropriate statistical tests, interpret results, and produce analysis reports with p-values, effect sizes, and confidence intervals. Use when analyzing experimental data for a paper.