How to install paper-compilation
npx skills add https://github.com/lingzhi227/agent-research-skills --skill paper-compilationFull instructions (SKILL.md)
Source of truth, from lingzhi227/agent-research-skills.
name: paper-compilation description: Compile LaTeX papers to PDF with automatic error detection, chktex style checking, and citation/reference validation. Runs the full pdflatex + bibtex pipeline. Use when the user wants to compile a paper, fix compilation errors, or debug LaTeX. argument-hint: [tex-file-path]
Paper Compilation
Compile a LaTeX paper to PDF with error detection and correction.
Input
$ARGUMENTS— Path to the main.texfile
Scripts
Compile paper
python ~/.claude/skills/paper-compilation/scripts/compile_paper.py paper/main.tex
python ~/.claude/skills/paper-compilation/scripts/compile_paper.py paper/main.tex --check-style
python ~/.claude/skills/paper-compilation/scripts/compile_paper.py paper/main.tex --output paper/output.pdf
Reports: compilation status, page count, warnings, citation/reference stats, style issues.
Validate citations before compiling
python ~/.claude/skills/citation-management/scripts/validate_citations.py \
--tex paper/main.tex --bib paper/references.bib --check-figures --figures-dir paper/figures/
Auto-fix LaTeX errors
python ~/.claude/skills/paper-compilation/scripts/fix_latex_errors.py \
--tex paper/main.tex --log compile.log --output paper/main_fixed.tex
Fixes: HTML tags in LaTeX, mismatched environments, missing figures. Key flags: --dry-run, --auto-detect
Compile with auto-fix retry
python ~/.claude/skills/paper-compilation/scripts/compile_paper.py paper/main.tex --auto-fix
Runs fix_latex_errors.py + recompile up to 3 rounds until compilation succeeds.
Workflow
Step 1: Pre-Compilation Validation
Run validate_citations.py to catch issues before compiling:
- Every
\cite{key}has a matching.bibentry - Every
\includegraphics{file}exists - No duplicate labels or sections
Step 2: Compile
Run compile_paper.py which executes: pdflatex → bibtex → pdflatex → pdflatex
Step 3: Error Correction Loop (up to 5 rounds)
If compilation fails, read the error output and fix:
! Undefined control sequence→ Add missing package or fix typo! Missing $ inserted→ Wrap math in$...$! Missing } inserted→ Fix unmatched braceCitation 'key' undefined→ Add to .bib or fix\cite</end{figure}>→ Replace with\end{figure}(HTML syntax in LaTeX)
Apply minimal fixes. Do not remove packages unnecessarily. Recompile after each fix.
Step 4: Post-Compilation Report
Check: page count vs venue limit, remaining warnings, chktex style issues.
Troubleshooting
pdflatex not found
# macOS
brew install --cask mactex-no-gui
# Ubuntu
sudo apt install texlive-full
Alternative: latexmk (auto-handles multiple passes)
latexmk -pdf -interaction=nonstopmode main.tex
Related Skills
- Upstream: latex-formatting, citation-management, figure-generation, table-generation
- Downstream: self-review
- See also: paper-assembly
Related skills
More from lingzhi227/agent-research-skills and the wider catalog.

paper-revision
Revise papers based on reviewer feedback. Map reviewer concerns to specific sections, apply targeted edits, run additional experiments if needed, and verify improvements. Use after receiving peer review with revision requests.

paper-to-code
Convert an ML research paper into a complete, runnable code repository. 3-stage pipeline from Paper2Code — Planning (UML + dependency graph) → Analysis (per-file logic) → Coding (dependency-ordered generation). Use for reproducing paper methods.

paper-writing-section
Write a specific section of an academic paper (Abstract, Introduction, Background, Related Work, Methods, Experiments, Results, Discussion/Conclusion) with section-specific guidance and two-pass refinement. Use when the user wants to write, draft, or improve a paper section.

rebuttal-writing
Write point-by-point rebuttals to reviewer comments. Extract concerns from reviews, generate evidence-based responses, and format as a structured rebuttal document. Use after receiving peer review feedback.

related-work-writing
Write Related Work sections that compare and contrast prior work with your approach. Organize by theme, cite broadly, and explain how your work differs. Use when writing or improving the Related Work section of a paper.

research-planning
Design research plans and paper architectures. Given a research topic or idea, generate structured plans with methodology outlines, paper structure, dependency-ordered task lists, UML diagrams, and experiment designs. Use when starting a new research project or paper.