AI Skills

Build scalable data pipelines, modern data warehouses, and real-time streaming architectures. Implements Apache Spark, dbt, Airflow, and cloud-native data platforms.

Spectral similarity and compound identification for metabolomics. Use for comparing mass spectra, computing similarity scores (cosine, modified cosine), and identifying unknown compounds from spectral libraries. Best for metabolite identification, spectral matching, library searching. For full LC-MS/MS proteomics pipelines use pyopenms.

Run AutoML / hyperparameter optimization (HPO) for NVIDIA TAO networks using AutoMLRunner. Handles algorithm

Lightweight WSI tile extraction and preprocessing. Use for basic slide processing, tissue detection, tile extraction, and stain normalization for H&E images. Best for simple pipelines, dataset preparation, and quick tile-based analysis. For advanced spatial proteomics, multiplexed imaging, or deep learning pipelines use pathml.

Finds and recovers content from Claude Code session history files. This skill should be used when searching for deleted files, tracking changes across sessions, analyzing conversation history, or recovering code from previous Claude interactions. Triggers include mentions of "session history", "recover deleted", "find in history", "previous conversation", or ".claude/projects".

Automate end-to-end content creation from research to video generation using AI (Claude/OpenAI) and Remotion

Integration with protocols.io API for managing scientific protocols. This skill should be used when working with protocols.io to search, create, update, or publish protocols; manage protocol steps and materials; handle discussions and comments; organize workspaces; upload and manage files; or integrate protocols.io functionality into workflows. Applicable for protocol discovery, collaborative protocol development, experiment tracking, lab protocol management, and scientific documentation.

Film and video storyboarding with shot vocabulary, continuity rules, and panel layout. Covers shot types, camera angles, movement, 180-degree rule, and annotation format. Use for: video planning, film pre-production, ad storyboards, music video planning, animation. Triggers: storyboard, storyboarding, shot list, film planning, video planning, pre production, shot composition, camera angles, scene planning, visual script, animatic, storyboard panels, video storyboard

Query the Precision Medicine Knowledge Graph (PrimeKG) for multiscale biological data including genes, drugs, diseases, phenotypes, and more.

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Keeps a long Claude Code task on-track — breaks out of looping/circular thinking, watches the context budget, bounds internal reasoning, and triggers a clean handoff before the window fills. Use when the model is repeating steps, re-reading the same files, second-guessing in circles, stuck or spinning, or running a long multi-step task at risk of exhausting context. Also use when the user says it is "looping", "going in circles", "stuck", "repeating itself", or asks for a handoff before running out of context.

Configure CCA (Continuous Clearing Auction) smart contract parameters through an interactive bulk form flow. Use when user says "configure auction", "cca auction", "setup token auction", "auction configuration", "continuous auction", or mentions CCA contracts.

Parse FCS (Flow Cytometry Standard) files v2.0-3.1. Extract events as NumPy arrays, read metadata/channels, convert to CSV/DataFrame, for flow cytometry data preprocessing.

TypeScript-first schema validation library with static type inference for form validation, API validation, and runtime type checking with compile-time types.

AI-powered content pipeline that auto-researches, generates scripts, and creates videos with Claude/OpenAI and Remotion

Molecular featurization for ML (100+ featurizers). ECFP, MACCS, descriptors, pretrained models (ChemBERTa), convert SMILES to features, for QSAR and molecular ML.

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Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for phylogenomics.

IBM quantum computing framework. Use when targeting IBM Quantum hardware, working with Qiskit Runtime for production workloads, or needing IBM optimization tools. Best for IBM hardware execution, quantum error mitigation, and enterprise quantum computing. For Google hardware use cirq; for gradient-based quantum ML use pennylane; for open quantum system simulations use qutip.

Turn a product idea into a manual-first process you can start delivering today. Use when you have an idea and want to figure out how to deliver value by hand before writing any code.

Advanced debugging specialist for diagnosing and resolving code issues. Use when user encounters bugs, errors, unexpected behavior, or mentions debugging.

Use when writing or reviewing Kotlin Flow state and event APIs with StateFlow, MutableStateFlow.update, SharedFlow, Channel, stateIn, SharingStarted, .value, receiveAsFlow, one-shot events, or sentinel initial values.

Frontend development guidelines for React/TypeScript applications. Modern patterns including Suspense, lazy loading, useSuspenseQuery, file organization with features directory, MUI v7 styling, TanStack Router, performance optimization, and TypeScript best practices. Use when creating components, pages, features, fetching data, styling, routing, or working with frontend code.

AI coding agent skill for building with EmDash, the full-stack TypeScript CMS built on Astro and Cloudflare

Creates a draft GitHub Issue with triage label from natural language description.

How to write well-structured Basic Memory notes: frontmatter, observations with semantic categories, relations with wiki-links, and best practices for building a rich knowledge graph. Use when creating or improving notes.

Performs deep Root Cause Analysis (RCA) on NVIDIA TAO Visual ChangeNet classification experiments with

Sync AgentOps skills.

Use for latency-sensitive systems such as realtime dashboards, market data, streaming agents, execution gateways, queues, caches, or HFT-like infrastructure where freshness and p95 latency matter.

Develop applications using the Docyrus API with @docyrus/api-client and @docyrus/signin libraries. Use when building apps that authenticate with Docyrus OAuth2 (PKCE, iframe, client credentials, device code), make REST API calls to Docyrus data source endpoints, construct query payloads with filters, aggregations, formulas, pivots, and child queries, or integrate with external connectors (discover connectors, send requests through provider auth, run actions). Triggers on tasks involving Docyrus API integration, @docyrus/api-client usage, @docyrus/signin authentication, data source query building, Docyrus REST endpoint consumption, connector discovery, or external provider requests.