How to install experiment-code
npx skills add https://github.com/lingzhi227/agent-research-skills --skill experiment-codeFull instructions (SKILL.md)
Source of truth, from lingzhi227/agent-research-skills.
name: experiment-code description: Write ML experiment code with iterative improvement. Generate training/evaluation pipelines, debug errors, and optimize results through code reflection. Use when implementing experiments for a research paper. argument-hint: [plan-or-idea]
Experiment Code
Generate and iteratively improve ML experiment code for research papers.
Input
$0— Task:generate,improve,debug,plot$1— Research plan, idea description, or error message
References
- Experiment prompts and patterns:
~/.claude/skills/experiment-code/references/experiment-prompts.md - Code patterns (error handling, repair, hill-climbing):
~/.claude/skills/experiment-code/references/code-patterns.md
Action: generate
Generate initial experiment code following this structure:
- Plan experiments first — List all runs needed (hyperparameter sweeps, ablations, baselines)
- Write self-contained code — All code in project directory, no external imports from reference repos
- Include proper logging — Save results to JSON, print intermediate metrics
- Generate figures — At minimum Figure_1.png and Figure_2.png
Mandatory Structure
project/
├── experiment.py # Main experiment script
├── plot.py # Visualization script
├── notes.txt # Experiment descriptions and results
├── run_1/ # Results from run 1
│ └── final_info.json
├── run_2/
└── ...
Constraints
- No placeholder code (
pass,...,raise NotImplementedError) - Must use actual datasets (not toy data unless explicitly requested)
- PyTorch or scikit-learn preferred (no TensorFlow/Keras)
- Each run uses:
python experiment.py --out_dir=run_i
Action: improve
Improve existing experiment code:
- Read current code and results
- Reflect on what worked and what didn't
- Apply targeted edits (prefer small edits over full rewrites)
- Re-run and compare scores
- Keep the best-performing code variant
Action: debug
Fix experiment code errors:
- Read the error message (truncate to last 1500 chars if very long)
- Identify the root cause
- Apply minimal fix
- Up to 4 retry attempts before changing approach
Action: plot
Generate publication-quality plots from experiment results:
- Read all
run_*/final_info.jsonfiles - Generate comparison plots with proper labels
- Use the figure-generation skill for styling
Rules
- Always plan experiments before writing code
- After each run, document results in notes.txt
- Include print statements explaining what results show
- Method MUST not get 0% accuracy — verify accuracy calculations
- Use seeds for reproducibility
- Before each experiment include a print statement explaining exactly what the results are meant to show
Related Skills
- Upstream: experiment-design, algorithm-design
- Downstream: data-analysis, backward-traceability
- See also: code-debugging, paper-to-code
Related skills
More from lingzhi227/agent-research-skills and the wider catalog.
literature-review
Conduct comprehensive literature reviews using multi-perspective dialogue simulation. Generate diverse expert personas, conduct grounded Q&A conversations, and synthesize findings into structured knowledge. Use when starting a new research project or writing a survey section.
literature-search
Search academic literature using Semantic Scholar, arXiv, and OpenAlex APIs. Returns structured JSONL with title, authors, year, venue, abstract, citations, and BibTeX. Use when the user needs to find papers, check related work, or build a bibliography.
figure-generation
Generate publication-quality scientific figures using matplotlib/seaborn with a three-phase pipeline (query expansion, code generation with execution, VLM visual feedback). Handles bar charts, line plots, heatmaps, training curves, ablation plots, and more. Use when the user needs figures, plots, or visualizations for a paper.
citation-management
Manage BibTeX citations for LaTeX papers. Harvest missing citations from a draft using Semantic Scholar, validate cite keys against .bib files, deduplicate entries, and format bibliography. Use when working with references, BibTeX, or citations.
latex-formatting
Handle LaTeX formatting, templates, and styling for academic papers. Set up conference templates (ICML, ICLR, NeurIPS, AAAI, ACL), fix formatting issues, manage packages, and ensure venue-specific compliance. Use when the user needs to set up a paper template, fix LaTeX formatting, or prepare for submission.
data-analysis
Generate statistical analysis code with 4-round review. Select appropriate statistical tests, interpret results, and produce analysis reports with p-values, effect sizes, and confidence intervals. Use when analyzing experimental data for a paper.